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17-656 ChIPAb+ Sox-2, clone 6F1.2 - ChIP Validated Antibody and Primer Set

17-656
25 assays  25 assays per set. Recommended use: ~4 μg antibody per chromatin immunoprecipitation (dependent upon biological context).
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Overview

Replacement Information

Key Spec Table

Species ReactivityKey Applications
H, MWB, DB, ICC, ChIP
Description
Catalogue Number17-656
Trade Name
  • ChIPAb+
  • Upstate
DescriptionChIPAb+ Sox-2, clone 6F1.2 - ChIP Validated Antibody and Primer Set
Alternate Names
  • Transcription factor SOX-2
  • SOX2
Background InformationAll ChIPAb+ antibodies are individually validated for chromatin precipitation, every lot, every time. Each ChIPAb+ antibody set includes control primers (tested every lot by qPCR) to biologically validate your IP results in a locus-specific context. The qPCR protocol and primer sequences are provided, allowing researchers to validate ChIP protocols when using our antibody in their chromatin context. Each set also includes a negative control antibody to ensure specificity of the ChIP reaction.
The ChIPAb+ Sox-2, clone 6F1.2 antibody/primer set includes the Sox-2, clone 6F1.2 antibody, a negative control antibody (purified mouse IgG), and qPCR primers which amplify a 95 bp region within the promoter of the human nanog gene. The Sox-2, clone 6F1.2 antibody and negative control antibodies are supplied in a scalable "per ChIP" reaction size and can be used to functionally validate the precipitation of Sox-2-associated chromatin.

Sox-2 plays a key role in embryonic stem cell development, and has been shown to help stem cells maintain pluripotent potential. It has also been shown to be associated with uncommitted dividing stem cell and precursor cells of the developing CNS.
References
Product Information
Components
  • Anti-Sox-2, clone 6F1.2 (mouse monoclonal IgG), Part No. CS204373.
    One vial containing 100 μg of protein A purified antibody in 140 μL of 0.02 M phosphate buffer pH 7.6 with 0.25 M NaCl containing 0.1% sodium azide, and 30% glycerol. Store at -20°C.
  • Normal Mouse IgG, Part No. CS200621.
    One vial containing 125 μg of purified mouse IgG in 125 μL storage buffer containing 0.1% sodium azide. Store at -20°C.
  • ChIP Primers, nanog promoter,
    Part No. CS204374. One vial containing 75 μL of 5 μM of each primer specific for the promoter region of human nanog.
    Store at -20°C.
    FOR: GTT CTG TTG CTC GGT TTT CT
    REV: TCC CGT CTA CCA GTC TCA CC
FormatPurified
Control
  • Includes negative control mouse IgG antibody and primers specific for human nanog promoter region.
Quality LevelMQ100
Applications
ApplicationThis ChIPAb+ Sox-2, clone 6F1.2 -ChIP Validated Antibody & Primer Set conveniently includes the antibody & the specific control PCR primers.
Key Applications
  • Western Blotting
  • Dot Blot
  • Immunocytochemistry
  • Chromatin Immunoprecipitation (ChIP)
Application NotesPlease refer to the EZ-Magna G ChIP™ (Cat. No. 17-409) or EZ-ChIP™ (Cat. No. 17-371) protocol for experimental details.
Biological Information
ImmunogenRecombinant GST Fusion protein.
Clone6F1.2
ConcentrationPlease refer to the Certificate of Analysis for the lot-specific concentration.
HostMouse
SpecificityRecognizes Sox-2, MW: ~34 kDa.
IsotypeIgG2bκ
Species Reactivity
  • Human
  • Mouse
Species Reactivity NoteHuman, mouse.
Not tested in other species.
Antibody TypeMonoclonal Antibody
Entrez Gene Number
Entrez Gene SummaryThis intronless gene encodes a member of the SRY-related HMG-box (SOX) family of transcription factors involved in the regulation of embryonic development and in the determination of cell fate. The product of this gene is required for stem-cell maintenance in the central nervous system, and also regulates gene expression in the stomach. Mutations in this gene have been associated with optic nerve hypoplasia and with syndromic microphthalmia, a severe form of structural eye malformation. This gene lies within an intron of another gene called SOX2 overlapping transcript (SOX2OT).
Gene Symbol
  • SOX2
  • ANOP3
  • MGC2413
  • MCOPS3
UniProt Number
UniProt SummaryFUNCTION: SwissProt: P48431 # Can form ternary complexes with OCT-1 or OCT-3 but acts as a transcriptional activator of FGF-4 enhancer DNA sequences only in conjunction with OCT-3 (By similarity).

SIZE: 317 amino acids; 34310 Da

SUBCELLULAR LOCATION: Nucleus.

DISEASE: SwissProt: P48431 # Defects in SOX2 are the cause of microphthalmia syndromic type 3 (MCOPS3) [MIM:206900]. MCOPS3 is characterized by the association of microphthalmia or clinical anophthalmia with anomalies such as microcephaly, short stature, hypogonadotropic hypogonadism, esophageal atresia and neurologic manifestations.

SIMILARITY: SwissProt: P48431 ## Contains 1 HMG box DNA-binding domain.
Molecular Weight~34 kDa
Physicochemical Information
Dimensions
Materials Information
Toxicological Information
Safety Information according to GHS
Safety Information
Product Usage Statements
Quality AssuranceChromatin Immunoprecipitation:
Sonicated chromatin prepared from Ntera 2 cells (3 X 106 cell equivalents per IP) were subjected to chromatin immunoprecipitation using 4 µg of either a normal mouse IgG, or Anti-Sox-2, clone 6F1.2 antibody and the Magna ChIP™ G Kit (Cat. No. 17-611). Successful immunoprecipitation of Sox-2-associated DNA fragments was verified by qPCR using ChIP Primers, nanog promoter (Figure 1).
Please refer to the EZ-Magna ChIP™ G (Cat. No. 17-409) or EZ-ChIP™ (Cat. No. 17-371) protocol for experimental details.
Usage Statement
  • Unless otherwise stated in our catalog or other company documentation accompanying the product(s), our products are intended for research use only and are not to be used for any other purpose, which includes but is not limited to, unauthorized commercial uses, in vitro diagnostic uses, ex vivo or in vivo therapeutic uses or any type of consumption or application to humans or animals.
Storage and Shipping Information
Storage ConditionsStable for 1 year at -20°C from date of receipt. Handling Recommendations: Upon first thaw, and prior to removing the cap, centrifuge the vial and gently mix the solution. Aliquot into microcentrifuge tubes and store at -20°C. Avoid repeated freeze/thaw cycles, which may damage IgG and affect product performance.
Packaging Information
Material Size25 assays
Material Package25 assays per set. Recommended use: ~4 μg antibody per chromatin immunoprecipitation (dependent upon biological context).
Transport Information
Supplemental Information
Specifications
Global Trade Item Number
Catalogue Number GTIN
17-656 04053252284472

Documentation

ChIPAb+ Sox-2, clone 6F1.2 - ChIP Validated Antibody and Primer Set MSDS

Title

Safety Data Sheet (SDS) 

ChIPAb+ Sox-2, clone 6F1.2 - ChIP Validated Antibody and Primer Set Certificates of Analysis

TitleLot Number
ChIPAb+ Sox-2, clone 6F1.2 - 2142699 2142699
ChIPAb+ Sox-2, clone 6F1.2 - 2450698 2450698
ChIPAb+ Sox-2, clone 6F1.2 - 1947173 1947173
ChIPAb+ Sox-2, clone 6F1.2 - 2067372 2067372
ChIPAb+ Sox-2, clone 6F1.2 - 2205936 2205936
ChIPAb+ Sox-2, clone 6F1.2 - 3197837 3197837
ChIPAb+ Sox-2, clone 6F1.2 - 3225602 3225602
ChIPAb+ Sox-2, clone 6F1.2 - 3437917 3437917
ChIPAb+ Sox-2, clone 6F1.2 - 3862821 3862821
ChIPAb+ Sox-2, clone 6F1.2 - 4163819 4163819

References

Reference overviewPub Med ID
SOX2 is a cancer-specific regulator of tumour initiating potential in cutaneous squamous cell carcinoma.
Siegle, JM; Basin, A; Sastre-Perona, A; Yonekubo, Y; Brown, J; Sennett, R; Rendl, M; Tsirigos, A; Carucci, JA; Schober, M
Nature communications  5  4511  2014

Show Abstract
25077433 25077433

Brochure

Title
Advance your Epigenetics Research
Product Selection Guide - Antibodies, small molecule inhibitors, kits, assays and proteins for signaling research.

Data Sheet

Title
Reprogramming Cell Fate and Function Novel Strategies for iPSC Generation, Characterization, and Differentiation

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Categories

Life Science Research > Antibodies and Assays > Immunoassays > Immunoprecipitation (IP) > Chromatin Immunoprecipitation (ChIP) > ChIP Validated Antibodies
Life Science Research > Antibodies and Assays > Primary Antibodies
Life Science Research > Protein Detection and Quantification > Immunoassays > Immunoprecipitation (IP) > Chromatin Immunoprecipitation (ChIP) > ChIP Validated Antibodies