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S7822 CpGenome Universal Unmethylated DNA

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S7822
10 µg  2 x 5 μg
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      Overview

      Replacement Information
      Description
      Catalogue NumberS7822
      Brand Family Chemicon®
      Trade Name
      • CpGenome
      • Chemicon
      DescriptionCpGenome Universal Unmethylated DNA
      OverviewCpGenome™ Universal Unmethylated DNA Set provides 2 separate genomic DNA controls for gene methylation studies. This product is intended for use with the CpGenome™ DNA Modification Kit (S7820) and can be subsequently used as an unmethylated DNA control for gene methylation studies.



      Materials Provided:

      Universal Unmethylated DNA Vial A contains 5 micrograms (50μL) of human genomic DNA at a concentration of 0.1 μg/μL. Universal Unmethylated DNA Vial B contains 5 micrograms (50μL), of genomic DNA isolated from a primary human fetal cell line at a concentration of 0.1 μg/μL. Note: The DNA must first be bisulfite modified using (S7820) to use a specific primer set for the unmethylated form of the gene of interest.



      Validation:

      Methylation-specific PCR (MSP) was performed on the DNA following bisulfite modification. Various primer sets from the CpG WIZ® product line were used in the assay. DNA from Vial A has been validated with primers from several CpG WIZ® amplification kits. Vial B DNA is also unmethylated at several promoters assayed with the CpG WIZ® kits and is supplied as an alternative source of DNA for promoters that may be partially methylated in Vial A DNA.



      CpG Genome™ and CpG WIZ® Methylation Products apply technologies exclusively licensed from The Johns Hopkins University School of Medicine. Methylation-specific PCR (MSP) technology is covered by U.S. Patent # 5,786,146.
      Background InformationMethylation of cytosines located 5' to guanosine is known to have a profound effect on the expression of many eukaryotic genes. In normal cells methylation occurs predominantly in CG-poor regions, while CG-rich areas, called CpG-islands remain unmethylated. The exceptions are the extensive methylation of CpG islands associated with transcriptional inactivation of regulatory regions of imprinted genes and genes on the inactive X-chromosome of females. Aberrant methylation of normally unmethylated CpG islands has been documented as a relatively frequent event in immortalized and transformed cells and has been associated with transcriptional inactivation of defined tumor suppresser genes in human cancers. Hundreds of CpG islands are now known to exhibit the characteristic of hypermethylation in tumors.
      Several methods have been developed to determine the methylation status of cytosine. These include digestion with methylation sensitive restriction enzymes as in restriction landmark genomic scanning, oligonucleotide arrays, genomic DNA sequencing and methylation specific PCR (MSP). Some techniques are more useful for discovery while others are better used for monitoring of known methylated cytosines. Genomic DNA sequencing, although time consuming and labor intensive, offers a more universal detection method. MSP is now an established technology for the monitoring of abnormal gene methylation in selected gene sequences. Utilizing small amounts of DNA, this procedure offers sensitive and specific detection of 5-methylcytosine in promoters. It is being exploited to define tumor suppresser gene function, and to provide a new strategy for early tumor detection.
      The initial step of both genomic sequencing and MSP is to perform a bisulfite modification of the DNA sample. MSP then involves PCR amplification with specific primers designed to distinguish methylated from unmethylated DNA.
      References
      Product Information
      HS Code2934 99 99
      PresentationLiquid in TE (10mM Tris-HCL, 0.1mM EDTA) with no preservatives.
      Quality LevelMQ100
      Applications
      ApplicationKit containing two separate unmethylated genomic DNA controls for gene methylation studies and methylation-specific PCR (MSP).
      Application NotesFor MSP primer design, please use the MethPrime software package. Click here
      Biological Information
      Species Reactivity
      • Human
      Physicochemical Information
      Dimensions
      Materials Information
      Toxicological Information
      Safety Information according to GHS
      Safety Information
      Product Usage Statements
      Usage Statement
      • Unless otherwise stated in our catalog or other company documentation accompanying the product(s), our products are intended for research use only and are not to be used for any other purpose, which includes but is not limited to, unauthorized commercial uses, in vitro diagnostic uses, ex vivo or in vivo therapeutic uses or any type of consumption or application to humans or animals.
      Storage and Shipping Information
      Storage ConditionsRecommended Storage: -15°C to -25°C, in aliquots, protected from freeze-thaws for up to two years from date of receipt. Do not freeze and thaw the same -20°C aliquot more than 3X for best results. Multiple freeze thaws can fragment DNA. Storage at -70°C can be used for longer term storage if necessary; minimize multiple freeze thaws for best results.
      Packaging Information
      Material Size10 µg
      Material Package2 x 5 μg
      Transport Information
      Supplemental Information
      Specifications
      Global Trade Item Number
      Catalogue Number GTIN
      S7822 08436037123313

      Documentation

      CpGenome Universal Unmethylated DNA SDS

      Title

      Safety Data Sheet (SDS) 

      CpGenome Universal Unmethylated DNA Certificates of Analysis

      TitleLot Number
      CpGenome Universal Unmethylated DNA Set - 2120104 2120104
      CpGenome Universal Unmethylated DNA Set - 2137068 2137068
      CpGenome Universal Unmethylated DNA Set - 1999688 1999688
      CpGenome Universal Unmethylated DNA Set - 2055325 2055325
      CpGenome Universal Unmethylated DNA Set - 2075944 2075944
      CpGenome Universal Unmethylated DNA Set - 2199003 2199003
      CpGenome Universal Unmethylated DNA Set - 2262758 2262758
      CpGenome™ Universal Unmethylated DNA Set 2929183
      CpGenome™ Universal Unmethylated DNA Set 2989759
      CpGenome™ Universal Unmethylated DNA Set 3068462

      References

      Reference overviewPub Med ID
      The epigenetic silencing of the estrogen receptor (ER) by hypermethylation of the ESR1 promoter is seen predominantly in triple-negative breast cancers in Indian women.
      Jyothi S Prabhu,Kanu Wahi,Aruna Korlimarla,Marjorrie Correa,Suraj Manjunath,N Raman,B S Srinath,T S Sridhar
      Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine  33  2012

      Show Abstract
      22362381 22362381

      Brochure

      Title
      CpG MethylQuest™ DNA Isolation Kit
      Shaping Epigenetics Discovery - Epigenetics Product Selection Brochure